Magliery, Thomas J: search on Z-Library

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1

Detecting Protein−Protein Interactions with a Green Fluorescent Protein Fragment Reassembly Trap: Scope and Mechanism

Magliery, Thomas J., Wilson, Christopher G. M., Pan, Weilan, Mishler, Dennis, Ghosh, Indraneel, Hamilton, Andrew D., Regan, Lynne

Journal:

Journal of the American Chemical Society

Year:

2005

Language:

english

File:

PDF, 604 KB

english, 2005

2

Expanding the genetic code: selection of efficient suppressors of four-base codons and identification of “shifty” four-base codons with a library approach in Escherichia coli

Thomas J Magliery, J.Christopher Anderson, Peter G Schultz

Journal:

Journal of Molecular Biology

Year:

2001

Language:

english

File:

PDF, 579 KB

english, 2001

3

Retraction of “Mutational Analysis of 48G7 Reveals that Somatic Hypermutation Affects Both Antibody Stability and Binding Affinity”

Sun, Sophie B., Sen, Shiladitya, Kim, Nam-Jung, Magliery, Thomas J., Schultz, Peter G., Wang, Feng

Journal:

Journal of the American Chemical Society

Year:

2018

Language:

english

File:

PDF, 216 KB

english, 2018

4

1H, 13C, 15N resonance assignment of recombinant Euplotes raikovi protein Er-23

Bowles, David P., Hansen, Alexandar L., Rhoads, Calvin A., Mohan, Sidharth, Yuan, Chunhua, Magliery, Thomas J.

Journal:

Biomolecular NMR Assignments

Year:

2018

Language:

english

File:

PDF, 1.68 MB

english, 2018

5

Resonance assignments of wild-type and two cysteine-free variants of the four-helix bundle protein, Rop

Bowles, David P., Yuan, Chunhua, Stephany, Kimberly R., Lavinder, Jason J., Hansen, Alexandar L., Magliery, Thomas J.

Journal:

Biomolecular NMR Assignments

Year:

2018

Language:

english

File:

PDF, 2.28 MB

english, 2018

6

Engineering a tRNA and Aminoacyl-tRNA Synthetase for the Site-Specific Incorporation of Unnatural Amino Acids into Proteins in vivo

David R. Liu, Thomas J. Magliery, Miro Pastrnak and Peter G. Schultz

Journal:

Proceedings of the National Academy of Sciences

Year:

1997

Language:

english

File:

PDF, 1.80 MB

english, 1997

7

Exploring the Limits of Codon and Anticodon Size

J.Christopher Anderson, Thomas J Magliery, Peter G Schultz

Journal:

Chemistry & Biology

Year:

2002

Language:

english

File:

PDF, 108 KB

english, 2002

8

Synthetic Approach to Stop-Codon Scanning Mutagenesis

Nie, Lihua, Lavinder, Jason J., Sarkar, Mohosin, Stephany, Kimberly, Magliery, Thomas J.

Journal:

Journal of the American Chemical Society

Year:

2011

Language:

english

File:

PDF, 3.86 MB

english, 2011

9

Protein stability: computation, sequence statistics, and new experimental methods

Magliery, Thomas J

Journal:

Current Opinion in Structural Biology

Year:

2015

Language:

english

File:

PDF, 363 KB

english, 2015

10

Stoichiometry of triple-sieve tRNA editing complex ensures fidelity of aminoacyl-tRNA formation

Chen, Lin, Tanimoto, Akiko, So, Byung Ran, Bakhtina, Marina, Magliery, Thomas J, Wysocki, Vicki H, Musier-Forsyth, Karin

Journal:

Nucleic Acids Research

Year:

2018

Language:

english

File:

PDF, 5.09 MB

english, 2018

11

Phylogenetic Spread of Sequence Data Affects Fitness of Consensus Enzymes: Insights from Triosephosphate Isomerase

Goyal, Venuka Durani, Sullivan, Brandon J., Magliery, Thomas J.

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2019

Language:

english

File:

PDF, 3.12 MB

english, 2019

12

High-Throughput Thermal Scanning: A General, Rapid Dye-Binding Thermal Shift Screen for Protein Engineering

Lavinder, Jason J., Hari, Sanjay B., Sullivan, Brandon J., Magliery, Thomas J.

Journal:

Journal of the American Chemical Society

Year:

2009

Language:

english

File:

PDF, 553 KB

english, 2009

13

Mutational Analysis of 48G7 Reveals that Somatic Hypermutation Affects Both Antibody Stability and Binding Affinity

Sun, Sophie B., Sen, Shiladitya, Kim, Nam-Jung, Magliery, Thomas J., Schultz, Peter G., Wang, Feng

Journal:

Journal of the American Chemical Society

Year:

2013

Language:

english

File:

PDF, 2.40 MB

english, 2013

14

Dramatic Differences in Organophosphorus Hydrolase Activity between Human and Chimeric Recombinant Mammalian Paraoxonase-1 Enzymes

Otto, Tamara C., Harsch, Christina K., Yeung, David T., Magliery, Thomas J., Cerasoli, Douglas M., Lenz, David E.

Journal:

Year:

2009

Language:

english

File:

PDF, 1.56 MB

english, 2009

15

Addressing the unmet need for visualizing conditional random fields in biological data

Ray, William C, Wolock, Samuel L, Callahan, Nicholas W, Dong, Min, Li, Q, Liang, Chun, Magliery, Thomas J, Bartlett, Christopher W

Journal:

BMC Bioinformatics

Year:

2014

Language:

english

File:

PDF, 4.07 MB

english, 2014

16

Solubilization and Humanization of Paraoxonase-1

Sarkar, Mohosin, Harsch, Christina Keventzidis, Matic, George T., Hoffman, Kathryn, Norris, Joseph R., Otto, Tamara C., Lenz, David E., Cerasoli, Douglas M., Magliery, Thomas J.

Journal:

Journal of Lipids

Year:

2012

Language:

english

File:

PDF, 2.47 MB

english, 2012

17

A New Orthogonal Suppressor tRNA/Aminoacyl-tRNA Synthetase Pair for Evolving an Organism with an Expanded Genetic Code

Miro Pastrnak, Thomas J. Magliery, Peter G. Schultz

Journal:

Helvetica Chimica Acta

Year:

2000

Language:

english

File:

PDF, 256 KB

english, 2000

18

Editorial overview: From powerful tools to useful products: protein engineering after 35 years of directed evolution

Grove, Tijana Z, Magliery, Thomas J

Journal:

Current Opinion in Structural Biology

Year:

2020

File:

PDF, 129 KB

2020

19

Cysteine-free rop: A four-helix bundle core mutant has wild-type stability and structure but dramatically different unfolding kinetics

Sanjay B. Hari, Chang Byeon, Jason J. Lavinder, Thomas J. Magliery

Journal:

Protein Science

Year:

2010

Language:

english

File:

PDF, 877 KB

english, 2010

20

The Genetic Code and the Origin of Life || Expanding the Genetic Code in Vitro and in Vivo

Magliery, Thomas J.

Year:

2004

Language:

english

File:

PDF, 2.07 MB

english, 2004

21

An Antibody with a Variable-Region Coiled-Coil “Knob” Domain

Zhang, Yong, Goswami, Devrishi, Wang, Danling, Wang, Tsung-Shing Andrew, Sen, Shiladitya, Magliery, Thomas J., Griffin, Patrick R., Wang, Feng, Schultz, Peter G.

Journal:

Angewandte Chemie

Year:

2014

Language:

english

File:

PDF, 601 KB

english, 2014

22

Cover Image, Volume 86, Issue 6

Goyal, Venuka Durani, Magliery, Thomas J.

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2018

File:

PDF, 1.01 MB

2018

23

Protein stability by number: high-throughput and statistical approaches to one of protein science's most difficult problems

Thomas J Magliery, Jason J Lavinder, Brandon J Sullivan

Journal:

Current Opinion in Chemical Biology

Year:

2011

Language:

english

File:

PDF, 382 KB

english, 2011

24

Library approaches to biophysical problems

Thomas J. Magliery, Lynne Regan

Journal:

Year:

2004

Language:

english

File:

PDF, 72 KB

english, 2004

25

An efficient and quantitative assay for epitope-tagged therapeutic protein development with a capillary western system

Li, Yong, Duah, Ernest, Long, Nick, Persaud, Avinash, VanGundy, Zachary, Magliery, Thomas, Poi, Ming J

Journal:

Year:

2019

Language:

english

File:

PDF, 741 KB

english, 2019

26

A New Functional Suppressor tRNA/Aminoacyl−tRNA Synthetase Pair for the in Vivo Incorporation of Unnatural Amino Acids into Proteins

Wang, Lei, Magliery, Thomas J., Liu, David R., Schultz, Peter G.

Journal:

Journal of the American Chemical Society

Year:

2000

Language:

english

File:

PDF, 31 KB

english, 2000

27

Sequence variation in ligand binding sites in proteins

Thomas J Magliery, Lynne Regan

Journal:

BMC Bioinformatics

Year:

2005

Language:

english

File:

PDF, 1.40 MB

english, 2005

28

Insights into the mechanism of paraoxonase-1: Comparing the reactivity of the six-bladed β-propeller hydrolases

Grunkemeyer, Timothy John, Mata, David Garcia, Doddapaneni, Kiran, Murali, Srividya, Magliery, Thomas J.

Journal:

Year:

2018

Language:

english

File:

PDF, 3.49 MB

english, 2018

29

Beyond Consensus: Statistical Free Energies Reveal Hidden Interactions in the Design of a TPR Motif

Thomas J. Magliery, Lynne Regan

Journal:

Journal of Molecular Biology

Year:

2004

Language:

english

File:

PDF, 904 KB

english, 2004

30

Re-engineering a split-GFP reassembly screen to examine RING-domain interactions between BARD1 and BRCA1 mutants observed in cancer patients

Sarkar, Mohosin, Magliery, Thomas J.

Journal:

Molecular BioSystems

Year:

2008

Language:

english

File:

PDF, 1.18 MB

english, 2008

31

Triosephosphate Isomerase by Consensus Design: Dramatic Differences in Physical Properties and Activity of Related Variants

Brandon J. Sullivan, Venuka Durani, Thomas J. Magliery

Journal:

Journal of Molecular Biology

Year:

2011

Language:

english

File:

PDF, 1.72 MB

english, 2011

32

Stabilizing Proteins from Sequence Statistics: The Interplay of Conservation and Correlation in Triosephosphate Isomerase Stability

Brandon J. Sullivan, Tran Nguyen, Venuka Durani, Deepti Mathur, Samantha Rojas, Miriam Thomas, Trixy Syu, Thomas J. Magliery

Journal:

Journal of Molecular Biology

Year:

2012

Language:

english

File:

PDF, 1.63 MB

english, 2012

33

Using Inner-Ear Cadherins to Test High-Throughput Thermal Screening Assays for Protein-Protein Interactions

Choudhary, Deepanshu, Kumar, Anusha, Magliery, Thomas J., Sotomayor, Marcos

Journal:

Biophysical Journal

Year:

2016

Language:

english

File:

PDF, 61 KB

english, 2016

34

Characterization of an ‘orthogonal’ suppressor tRNA derived from E. coli tRNA2Gln

David R. Liu, Thomas J. Magliery, Peter G. Schultz

Journal:

Chemistry & Biology

Year:

1997

Language:

english

File:

PDF, 1.16 MB

english, 1997

35

Combinatorial approaches to protein stability and structure

Thomas J. Magliery, Lynne Regan

Journal:

Year:

2004

Language:

english

File:

PDF, 372 KB

english, 2004

36

Mechanistic insights into the hydrolysis of organophosphorus compounds by paraoxonase-1: exploring the limits of substrate tolerance in a promiscuous enzyme

Sivaramakrishnan Muthukrishnan, Vivekanand S. Shete, Toby T. Sanan, Shubham Vyas, Shameema Oottikkal, Lauren M. Porter, Thomas J. Magliery, Christopher M. Hadad

Journal:

Journal of Physical Organic Chemistry

Year:

2012

Language:

english

File:

PDF, 2.31 MB

english, 2012

37

An Antibody with a Variable-Region Coiled-Coil “Knob” Domain

Zhang, Yong, Goswami, Devrishi, Wang, Danling, Wang, Tsung-Shing Andrew, Sen, Shiladitya, Magliery, Thomas J., Griffin, Patrick R., Wang, Feng, Schultz, Peter G.

Journal:

Angewandte Chemie International Edition

Year:

2014

Language:

english

File:

PDF, 608 KB

english, 2014

38

Detecting protein-protein interactions with GFP-fragment reassembly

Wilson, Christopher GM, Magliery, Thomas J, Regan, Lynne

Journal:

Year:

2004

Language:

english

File:

PDF, 182 KB

english, 2004

39

Phylogenetic Spread of Sequence Data Affects Fitness of SOD1 Consensus Enzymes: Insights from Sequence Statistics and Structural Analyses

Goyal, Venuka Durani, Magliery, Thomas J.

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2018

Language:

english

File:

PDF, 2.34 MB

english, 2018

40

Simplifying protein expression with ligation-free, traceless and tag-switching plasmids

Durani, Venuka, Sullivan, Brandon J., Magliery, Thomas J.

Journal:

Protein Expression and Purification

Year:

2012

Language:

english

File:

PDF, 705 KB

english, 2012

41

Unnatural Protein Engineering: Producing Proteins with Unnatural Amino Acids

Magliery, Thomas

Journal:

Medicinal Chemistry Reviews - Online

Year:

2005

Language:

english

File:

PDF, 304 KB

english, 2005

42

Expression and purification of a recombinant amyloidogenic peptide from transthyretin for solid-state NMR spectroscopy

Philippe S. Nadaud, Mohosin Sarkar, Bo Wu, Cait E. MacPhee, Thomas J. Magliery, Christopher P. Jaroniec

Journal:

Protein Expression and Purification

Year:

2010

Language:

english

File:

PDF, 531 KB

english, 2010

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